Hopf_bifurcation,_with_limit_cycle_up_to_order_3-2..gif


Summary

Description
English: ```python

from tqdm import tqdm import numpy as np import matplotlib.pyplot as plt from scipy.integrate import solve_ivp import os

escape_size = 2.0 # If a trajectory is this distance away from 0, we assume it has escaped and stop simulating it. max_mu = 0.22 mu_resolution = 120 mus = np.linspace(0.001, max_mu, mu_resolution) ** 2 for i, mu in enumerate(tqdm(mus)):

 fig, ax = plt.subplots(figsize=(16,16))
 def system(t, y):
     v, w = y
     dv = mu * v + w - v**2
     dw = -v + mu * w + 2 * v**2
     dv *= (np.abs(v) < 2.0) * (np.abs(w) < 2.0)
     dw *= (np.abs(v) < 2.0) * (np.abs(w) < 2.0)
     return [dv, dw]
 def system_reversed(t, y):
     v, w = y
     dv = mu * v + w - v**2
     dw = -v + mu * w + 2 * v**2
     dv *= (np.abs(v) < 2.0) * (np.abs(w) < 2.0)
     dw *= (np.abs(v) < 2.0) * (np.abs(w) < 2.0)
     return [-dv, -dw]
 x_root = (mu**2+1)/(2+mu)
 y_root = -mu * x_root + x_root ** 2
 vmin, vmax, wmin, wmax = -0.4,0.4,-0.4,0.4
 # Hopf bifurcation circle
 if mu > 0:
     thetas = np.linspace(0, 2*np.pi, 1000)
     xs = np.sqrt(2*mu) * np.cos(thetas)
     ys = -np.sqrt(2*mu) * np.sin(thetas)
     ax.plot(xs, ys, color='r', linewidth=1, label="$\mu^{1/2}$ order")  
     xs += mu * (2-2/3 * np.sin(2*thetas)-2/3 * np.cos(2*thetas))
     ys += mu * (1+4/3*np.sin(2*thetas) - 1/3*np.cos(2*thetas))
     ax.plot(xs, ys, color='b', linewidth=1, label="$\mu$ order")  
     xs += mu**1.5 / np.sqrt(72) * (5 * np.sin(3*thetas) - np.cos(3*thetas))
     ys += mu**1.5 / np.sqrt(72) * (36 * np.sin(thetas) + 28 * np.cos(thetas) - 5 * np.sin(3*thetas) + 7 * np.cos(3*thetas))
     ax.plot(xs, ys, color='k', linewidth=1, label="$\mu^{3/2}$ order")  
     radius = xs[0]
 t_span = np.array([0, 14])
 trajectory_resolution = 10
 epsilon = 0.01
 initial_conditions = []
 initial_conditions += [(x, 0)  for x in np.linspace(vmin, vmax, trajectory_resolution)]
 initial_conditions_2 = []
 if mu > 0:
   initial_conditions_2 = [(radius *(1 + dx), 0) for dx in np.linspace(-0.08, 0.08, 5)]
 sols = {}
 sols_2 = {}
 for ic in initial_conditions:
     sols[ic] = solve_ivp(system, [0,50], ic, dense_output=True, max_step=0.05)
 for ic in initial_conditions_2:
     sols_2[ic] = solve_ivp(system, [0, min(0.1 * t_span[1]/mu, 200)], ic, dense_output=True, max_step=0.05)
 vs = np.linspace(vmin, vmax, 200)
 v_axis = np.linspace(vmin, vmax, 20)
 w_axis = np.linspace(wmin, wmax, 20)


 v_values, w_values = np.meshgrid(v_axis, w_axis)
 dv, dw = system(0, [v_values, w_values])
 # integral curves
 # ax.scatter([x for x, y in initial_conditions_2], [y for x, y in initial_conditions_2])
 for ic in initial_conditions:
   sol = sols[ic]
   ax.plot(sol.y[0], sol.y[1],alpha=0.2, linewidth=0.5, color='k')
 for ic in initial_conditions_2:
   sol = sols_2[ic]
   ax.plot(sol.y[0], sol.y[1],alpha=0.3, linewidth=0.5, color='g')
 # vector fields
 arrow_lengths = np.sqrt(dv**2 + dw**2)
 alpha_values = 1 - (arrow_lengths / np.max(arrow_lengths))**0.4
 ax.quiver(v_values, w_values, dv, dw, color='blue', linewidth=0.5, scale=25, alpha=alpha_values)
ax.set_title(f'Hopf Bifurcation Model\n$\mu={mu:.4f
})
 # ax.legend()
 ax.set_xlim(vmin, vmax)
 ax.set_ylim(wmin, wmax)
 ax.legend(loc='lower left')
 # ax.set_xticks([])
 # ax.set_yticks([])
 dir_path = f"./hopf_3"
 if not os.path.exists(dir_path):
   os.makedirs(dir_path)
 fig.savefig(f"{dir_path}/{i}.png")
 # plt.show()
 plt.close()

import imageio.v3 as iio from natsort import natsorted import moviepy.editor as mp

for dir_path in ["./hopf_3"]:

   file_names = natsorted((fn for fn in os.listdir(dir_path) if fn.endswith('.png')))
   # Create a list of image files and set the frame rate
   images = []
   fps = 12
   # Iterate over the file names and append the images to the list
   for file_name in file_names:
       file_path = os.path.join(dir_path, file_name)
       images.append(iio.imread(file_path))
   filename = dir_path[2:]
   iio.imwrite(f"{filename}.gif", images, duration=1000/fps, rewind=True)
   clip = mp.ImageSequenceClip(images, fps=fps)
   clip.write_videofile(f"{filename}.mp4")
```
Source Own work Edit this at Structured Data on Commons
Author

|date=2023-04-26 |source= Own work |author= Cosmia Nebula }}

Licensing

I, the copyright holder of this work, hereby publish it under the following license:
w:en:Creative Commons
attribution share alike
You are free:
  • to share – to copy, distribute and transmit the work
  • to remix – to adapt the work
Under the following conditions:
  • attribution – You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.
  • share alike – If you remix, transform, or build upon the material, you must distribute your contributions under the same or compatible license as the original.

Captions

Add a one-line explanation of what this file represents

Items portrayed in this file

depicts

image/gif