Anders_Krogh

Anders Krogh

Anders Krogh is a bioinformatician at the University of Copenhagen,[1] where he leads the university's bioinformatics center. He is known for his pioneering work on the use of hidden Markov models in bioinformatics (together with David Haussler),[2][3][4] and is co-author of a widely used textbook in bioinformatics.[5] In addition, he also co-authored one of the early textbooks on neural networks.[6] His current research interests include promoter analysis,[7][8][9] non-coding RNA,[10][11][12] gene prediction[13][14][15] and protein structure prediction.[16][17][18][19][20]

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In 2017, Krogh was elected a Fellow of the International Society for Computational Biology (ISCB).[21]

See also


References

  1. "User:Krogh - BINF - Bioinformatics Centre". Archived from the original on 2011-09-02. Retrieved 2011-04-14. Professor Anders Krogh, The Bioinformatics Centre, Department of Molecuar Biology, University of Copenhagen
  2. Krogh A, Brown M, Mian IS, Sjölander K, Haussler D (1994). "Hidden Markov models in computational biology. Applications to protein modeling". J. Mol. Biol. 235 (5): 1501–31. doi:10.1006/jmbi.1994.1104. PMID 8107089.
  3. Krogh A, Mian IS, Haussler D (1994). "A hidden Markov model that finds genes in E. coli DNA". Nucleic Acids Res. 22 (22): 4768–78. doi:10.1093/nar/22.22.4768. PMC 308529. PMID 7984429.
  4. Introduction to the Theory of Neural Computation (Santa Fe Institute Studies in the Sciences of Complexity). (1991) John A. Hertz, Richard G. Palmer, Anders Krogh, Westview Press
  5. Frith MC, Valen E, Krogh A, Hayashizaki Y, Carninci P, Sandelin A (2008). "A code for transcription initiation in mammalian genomes". Genome Res. 18 (1): 1–12. doi:10.1101/gr.6831208. PMC 2134772. PMID 18032727.
  6. Lindgreen S, Gardner PP, Krogh A (2007). "MASTR: multiple alignment and structure prediction of non-coding RNAs using simulated annealing". Bioinformatics. 23 (24): 3304–11. CiteSeerX 10.1.1.563.7072. doi:10.1093/bioinformatics/btm525. PMID 18006551.
  7. Lindgreen S, Gardner PP, Krogh A (2006). "Measuring covariation in RNA alignments: physical realism improves information measures". Bioinformatics. 22 (24): 2988–95. doi:10.1093/bioinformatics/btl514. PMID 17038338.
  8. Krogh A, Larsson B, von Heijne G, Sonnhammer EL (2001). "Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes". J Mol Biol. 305 (3): 567–580. doi:10.1006/jmbi.2000.4315. PMID 11152613.
  9. Winther O, Krogh A (2004). "Teaching computers to fold proteins". Phys. Rev. E. 70 (3): 030903. arXiv:cond-mat/0309497. Bibcode:2004PhRvE..70c0903W. doi:10.1103/PhysRevE.70.030903. PMID 15524499. S2CID 103560.
  10. Boomsma W, Mardia KV, Taylor CC, Ferkinghoff-Borg J, Krogh A, Hamelryck T (2008). "A generative, probabilistic model of local protein structure". PNAS. 105 (26): 8932–8937. Bibcode:2008PNAS..105.8932B. doi:10.1073/pnas.0801715105. PMC 2440424. PMID 18579771.

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